QR-bill as a payment method in the Swiss online shop: How it works

The Swiss QR-invoice (Swiss QR Invoice) can be used as a fully fledged payment method in e-commerce checkout — not just for sending invoices by post. After placing an order, buyers receive a QR code that they scan and pay directly via their e-banking app. For Comerciantes, the QR-bill is the most cost-effective form of purchase on account with transaction fees from 0.50% (minimum EUR 1.50 per transaction), albeit without credit checks and without risk assumption.

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The Swiss QR-bill (Swiss QR Invoice) can be used as a fully fledged payment method in e-commerce checkout — not just for sending invoices by post. After placing an order, buyers receive a QR code that they scan and pay directly via their e-banking app. For merchants (Comerciantes), the QR-bill is the most cost-effective form of purchase on account, with transaction fees starting at 0.50% (minimum EUR 1.50 per transaction), albeit without credit checks and without risk assumption.

This guide shows you step-by-step how the QR-bill works in online checkout, how to automate payment reconciliation, and which shops this model is particularly suitable for.

1. What the QR-bill is in an e-commerce context — and what it is not

The QR-bill was introduced in 2020 by the Swiss Bankers Association (SwissBanking) and SIX Group to replace the old payment slips (red and orange) with a standardised, digitally readable format. At its core, it is a standardised payment part with a Swiss QR Code containing all payment information: payee IBAN, amount, reference number, and structured payment information.

In an e-commerce context, this means: the QR-bill is not sent on paper, but provided as a digital payment part in checkout or via email after ordering. Buyers scan the QR code with their mobile banking app and initiate the payment. The QR-bill is not a BNPL solution — no credit check takes place, and the default risk rests entirely with you as the merchant (Comerciante).

Important: The QR-bill as a payment method in checkout is not the same as traditional invoicing. With traditional invoicing, you create an invoice manually and send it — the process is decoupled from the shop. With the QR-bill as a checkout payment method, the process is integrated into the ordering process, and payment reconciliation can be automated.

2. How the QR-bill works in online checkout: procedure for buyers and merchants (Comerciantes)

The process is divided into five steps:

Step 1: The buyer selects "Purchase on account" or "QR-bill" as the payment method at checkout. The PSP or shop system generates a QR-bill with a unique QR reference (QRR) or SCOR reference.

Step 2: The order is confirmed. The buyer receives the QR-bill as a PDF via email or directly on the order confirmation screen — featuring the Swiss QR Code and the payment terms.

Step 3: The buyer opens their e-banking or mobile banking app and scans the QR code. All payment information is filled in automatically. With one click, the payment is initiated.

Step 4: The buyer's bank transfers the amount to the payee IBAN. Depending on the bank, this takes 1–2 business days within Switzerland.

Step 5: You as the merchant (Comerciante) receive a CAMT.054 credit notification from your bank. This contains the QR reference, which allows the payment to be automatically matched to the order.

3. Payment reconciliation: CAMT.054, reference number, and automatic matching

Automatic payment reconciliation is the biggest efficiency gain of the QR-bill compared to traditional invoices sent by post. It operates via three components:

The QR reference (QRR) is a 27-digit reference number based on the QR-IBAN. It is uniquely generated for each order. Alternatively, the Structured Creditor Reference (SCOR) according to ISO 11649 can be used, which also works Outside Switzerland.

The CAMT.054 notification is an XML file in the ISO 20022 standard that your bank automatically provides to you. It contains all credits along with their respective reference numbers. Your ERP system, accounting tool, or PSP can import this notification and automatically assign the payment to the correct order.

In practice, this means: when a customer transfers EUR 89.00 to your account (Una cuenta) with the QR reference 21 00000 00003 13947 14300 09017, your system automatically matches the payment to order #13947. Without manual reconciliation, without trawling through bank statements.

Prerequisite: You require a QR-IBAN (not just a standard IBAN), which you apply for through your bank. In addition, your software must be able to process CAMT.054 notifications. Most modern ERP and accounting solutions (bexio, Abacus, Run my Accounts, Klara) support this natively. If you use the QR-bill as a payment method via Payrexx Pay, Payrexx handles the reconciliation: the payment is automatically assigned to the transaction and remitted with the weekly payout.

4. Payment terms and dunning process: When is the invoice due, what happens in case of default?

Unlike BNPL providers that prescribe a fixed payment period of 14 or 30 days, with the QR-bill you determine the payment term yourself. Typical periods are 10, 14, or 30 days from the invoice date.

If the payment term has expired and no payment has been received, your dunning process begins. In Switzerland, there is no statutory obligation to send reminders — in principle, you can initiate debt collection immediately after the deadline passes. In practice, however, a stepped procedure is recommended:

Payment reminder after 5–7 days overdue, written politely. First formal reminder after 14 days overdue, with a new payment term of 10 days. Second reminder after another 10 days, notifying of impending debt collection. Debt enforcement request (Betreibungsbegehren) at the responsible debt collection office (Art. 67 SchKG) if payment still fails to arrive.

The costs for a debt enforcement request range between EUR 7 and EUR 400 depending on the claim amount, in accordance with the Ordinance on Fees under the SchKG (GebV SchKG). You as the creditor must advance these costs.

5. QR-bill vs. traditional postal invoice: What changes for online shops

Switching to the QR-bill as a checkout payment method offers several advantages compared to traditional invoicing by post:

Dimension

Traditional invoice by post

QR-bill in checkout

Invoice creation

Manual or via ERP

Automatic via PSP/shop system

Dispatch

Postal letter or PDF via email

Digital within the order process

Payment reconciliation

Manual (reviewing bank statements)

Automatic via CAMT.054

Payment duration

3–10 days (postal delivery + transfer)

1–2 days (direct bank transfer)

Error rate

High (typos, incorrect IBAN)

Low (QR code contains all data)

Cost per invoice

Postage + printing + manual effort

Transaction fee (0.50–0.60%, min. EUR 1.50)

Default risk

Merchant (Comerciante)

Merchant (Comerciante) (identical)

6. Which shops and industries the QR-bill is particularly suitable for

The QR-bill as a checkout payment method is particularly suitable for:

B2B shops and ordering platforms where corporate clients are accustomed to paying via bank transfer. The QR-bill makes this process digital and automatable.

Shops with a high regular customer base, where the default risk is known and low. If you know that 95% of your customers pay reliably, you do not need expensive BNPL risk assumption.

Shops with high average order values (over EUR 200), where the percentage fee of the QR-bill (0.50%, min. EUR 1.50) is significantly cheaper than the BNPL fee (2–3%).

Clubs, associations, and non-profit organisations where membership fees and donations are collected via QR-bill.

The QR-bill is less suitable for shops with a high share of new customers and low order values in the fashion or lifestyle segment — here, the default risk is high, and BNPL with risk assumption is the better choice.

Checklist: Setting up the QR-bill as a payment method in your online shop

  • Apply for a QR-IBAN from your Swiss bank if you do not already have one.

  • Check whether your PSP or shop system supports the QR-bill as a checkout payment method.

  • Ensure that your accounting software can process CAMT.054 notifications.

  • Define the payment term (10, 14, or 30 days) and communicate it clearly on the QR-bill.

  • Set up an automated dunning process: payment reminder, 1st reminder, 2nd reminder.

  • Decide whether to offer the QR-bill alongside BNPL methods — both can be offered concurrently.

  • Test the procedure: place an order in your own shop, scan the QR code, and verify whether matching works.

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Offer QR-bill directly in the checkout
Activate QR-reference invoice in your shop?

Payrexx offers the QR-bill as an integrated payment method via Payrexx Pay — without a separate bank contract.

Find out how to set up the QR-bill as a payment method in just a few steps.

Frequently asked questions about the QR-bill as a payment method in the online shop

What is the difference between QR-bill and Pay later with Klarna?

With the QR-bill, you as a Comerciante bear the default risk yourself and pay a fee of only 0.50–0.60% (at least EUR 1.50 per transaction). With Klarna, Klarna assumes the risk and credit assessment, but charges 1.60–2.40 % plus a fixed fee.

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How does the automatic payment reconciliation work with the QR-bill?

Every QR-bill contains a unique reference number (QRR or SCOR). When customers pay, your bank provides a CAMT.054 message with this reference. Your system automatically assigns the payment to the order.

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Do I need a QR-IBAN for the QR-bill in the online shop?

Yes, if you want to work with QR references (QRR) — and this is recommended for automatic payment reconciliation. You can apply for the QR-IBAN free of charge from your Swiss bank.

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Can I also use the QR-bill for B2B customers in the online shop?

Yes, the QR-bill is actually particularly well suited for B2B, as corporate clients are used to paying by bank transfer. The process is automated and accelerated by the QR code.

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What does the QR-bill cost as a payment method in the online shop?

The transaction fee is 0.50 to 0.60% depending on the plan, at least EUR 1.50 per transaction. This makes the QR-bill the most cost-effective form of invoice purchasing — although you bear the default risk yourself.

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How long does it take for a payment by QR-bill to be received?

Usually 1–2 business days if the customer initiates the payment via e-banking or mobile banking. The prerequisite is that both accounts are with a Swiss bank.

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Activate QR-reference invoice in your shop?

Find out how to set up the QR-bill as a payment method in just a few steps.

Activate QR-reference invoice in your shop?

Find out how to set up the QR-bill as a payment method in just a few steps.