QR-bill as a payment method in Swiss online shops: How it works

The Swiss QR-Invoice can be used as a fully-fledged payment method in the e-commerce checkout — not just for sending invoices by mail. After placing an order, buyers receive a QR code that they can scan and pay directly via their e-banking app. For Comerciantess, the QR-Invoice is the most cost-effective form of invoice purchasing with transaction fees starting at 0.50%, although without credit checks and without risk assumption.

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The Swiss QR Invoice (Swiss QR Invoice) can be used as a full-fledged payment method in e-commerce checkout — not just as an invoice sent by mail. After placing an order, buyers receive a QR code that they can scan and pay directly via their e-banking app. For merchants (comerciantes), the QR invoice is the cheapest form of purchase on account with transaction fees starting at 0.50 %, but without credit checks and without risk assumption.

This guide shows you step-by-step how the QR invoice works in online checkout, how you can automate payment reconciliation, and for which shops this model is particularly suitable.

1. What the QR invoice is in an e-commerce context — and what it is not

The QR-Rechnung was introduced in 2020 by the Swiss Bankers Association (SwissBanking) and the SIX Group to replace the old payment slips (red and orange) with a uniform, digitally readable format. At its core, it is a standardized payment part with a Swiss QR Code that contains all payment information: recipient IBAN, amount, reference number, and structured payment information.

In an e-commerce context, this means: The QR invoice is not sent on paper, but is provided as a digital payment part during checkout or by email after the order is placed. Buyers scan the QR code with their mobile banking app and initiate the payment. The QR invoice is not a BNPL solution — there is no credit check, and the risk of default lies entirely with you as the merchant (comerciante).

Important: The QR invoice as a payment method in checkout is not the same as classic invoicing. With classic invoicing, you create an invoice manually and send it — the process is decoupled from the shop. With the QR invoice as a checkout payment method, the process is integrated into the ordering workflow, and payment reconciliation can be automated.

2. How the QR invoice works in online checkout: Workflow for buyers and merchants (comerciantes)

The workflow is divided into five steps:

Step 1: The buyer selects "Purchase on account" or "QR invoice" as the payment method in the checkout. The PSP or the shop system generates a QR invoice with a unique QR reference (QRR) or SCOR reference.

Step 2: The order is confirmed. The buyer receives the QR invoice as a PDF by email or directly on the order confirmation screen — containing the Swiss QR Code and the payment deadline.

Step 3: The buyer opens their e-banking or mobile banking app and scans the QR code. All payment information is filled in automatically. The payment is initiated with a single click.

Step 4: The buyer’s bank transfers the amount to the recipient's IBAN. Depending on the bank, this takes 1–2 business days within Switzerland.

Step 5: You as the merchant (comerciante) receive a CAMT.054 credit notification from your bank. This contains the QR reference, which allows the payment to be automatically matched to the order.

3. Payment reconciliation: CAMT.054, reference number, and automatic matching

Automatic payment reconciliation is the biggest efficiency gain of the QR invoice compared to classic invoicing by mail. It works via three components:

The QR reference (QRR) is a 27-digit reference number based on the QR-IBAN. It is uniquely generated for each order. Alternatively, the Structured Creditor Reference (SCOR) according to ISO 11649 can be used, which also works outside Switzerland (outside Switzerland).

The CAMT.054 notification is an XML file in the ISO-20022 standard that your bank provides to you automatically. It contains all credits with their respective reference number. Your ERP system, your accounting tool, or your PSP can read this notification and automatically assign the payment to the correct order.

In practice, this means: If a customer transfers EUR 89.00 to your account (una cuenta) and the QR reference contains 21 00000 00003 13947 14300 09017, your system automatically assigns the payment to order #13947. Without manual reconciliation, without searching through bank statements.

Prerequisite: You need a QR-IBAN (not just a standard IBAN), which you apply for at your bank. In addition, your software must be able to process CAMT.054 notifications. Most modern ERP and accounting solutions (Bexio, Abacus, Run my Accounts, Klara) support this natively.

4. Payment terms and dunning: When is the invoice due, what happens in case of default?

Unlike BNPL providers, who specify a fixed payment term of 14 or 30 days, with the QR invoice you determine the payment term yourself. Usual terms are 10, 14, or 30 days from the invoice date.

If the payment term has expired and no payment has been received, your dunning process begins. In Switzerland, there is no legally prescribed dunning obligation — in principle, you can initiate debt collection immediately after the deadline has expired. In practice, however, a stepped process is recommended:

Payment reminder after 5–7 days overdue, friendly worded. First dunning letter after 14 days overdue, with a new payment term of 10 days. Second dunning letter after another 10 days, with notification of debt collection. Debt collection petition at the relevant debt collection office (Art. 67 SchKG), if payment is still outstanding.

Depending on the amount of the claim, the costs for a debt collection petition are between EUR 7 and EUR 400 in accordance with the Gebührenverordnung zum SchKG (GebV SchKG). You must advance these costs as the creditor.

5. QR invoice vs. classic invoice by mail: What changes for online shops

Switching to the QR invoice as a checkout payment method brings several advantages compared to classic invoicing:

Dimension

Classic invoice by mail

QR invoice in checkout

Invoice creation

Manually or via ERP

Automatically by PSP/shop system

Dispatch

Postal mail or PDF by email

Digital in the checkout process

Zahlungsabgleich

Manual (checking bank statement)

Automatic via CAMT.054

Payment duration

3–10 days (postal delivery + transfer)

1–2 days (direct bank transfer)

Error rate

High (typos, incorrect IBAN)

Low (QR code contains all data)

Costs per invoice

Postage + print + manual effort

Transaction fee (0.50–0.60 %)

Risk of default

Merchant (comerciante)

Merchant (comerciante) (identical)

6. For which shops and industries the QR invoice is particularly suitable

The QR invoice as a checkout payment method is particularly suitable for:

B2B shops and ordering platforms where corporate clients are accustomed to paying by bank transfer. The QR invoice makes this process digital and automatable.

Shops with a high rate of loyal customers where the risk of default is known and low. If you know that 95 % of your customers pay reliably, you do not need expensive BNPL risk assumption.

Shops with large shopping carts (above EUR 200), where the percentage fee of the QR invoice (0.50 %) is significantly cheaper than the BNPL fee (2–3 %).

Associations, federations, and non-profit organizations where membership fees and donations are collected via QR invoice.

The QR invoice is less suitable for shops with a high proportion of new customers and small shopping carts in the fashion or lifestyle segment — here, the risk of default is high, and BNPL with risk assumption is the better choice.

Checklist: Setting up the QR invoice as a payment method in your online shop

  • Apply for a QR-IBAN from your Swiss bank if you do not have one yet.

  • Check whether your PSP or shop system supports the QR invoice as a checkout payment method.

  • Ensure that your accounting software can process CAMT.054 notifications.

  • Define the payment term (10, 14, or 30 days) and communicate it clearly on the QR invoice.

  • Set up an automated dunning system: payment reminder, 1st dunning letter, 2nd dunning letter.

  • Decide whether you want to offer the QR invoice alongside BNPL methods — both simultaneously are possible.

  • Test the workflow: Order in your own shop, scan the QR code and check whether the assignment works.

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Offer QR-bill directly in the checkout
Activate QR-bill in your shop?

Payrexx offers the QR-bill as an integrated payment method via Payrexx Pay — without a separate bank contract.

Find out how to set up the QR-bill as a payment method in just a few steps.

Frequently asked questions about the QR-bill as a payment method in the online shop

What is the difference between QR-bill and purchase on account with Klarna?

With the QR-invoice, you as a Comerciante bear the default risk yourself and pay only a 0.50–0.60 % fee. With Klarna, Klarna assumes the risk and the credit check, but charges 1.60–2.40 % plus a fixed fee for this.

View detailed response

How does the automatic payment reconciliation work with the QR-bill?

Every QR-bill contains a unique reference number (QRR or SCOR). When the customer pays, your bank delivers a CAMT.054 message with this reference. Your system automatically assigns the payment to the order.

View detailed response

Do I need a QR-IBAN for the QR-bill in the online shop?

Yes, if you want to work with QR references (QRR) — and this is recommended for automatic payment reconciliation. You can apply for the QR-IBAN from your Swiss bank free of charge.

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Can I also use the QR-bill for B2B customers in the online shop?

Yes, the QR-bill is actually particularly well-suited for B2B, because corporate customers are used to paying by bank transfer. The process is automated and accelerated by the QR code.

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How much does the QR-bill cost as a payment method in the online shop?

The transaction fee is 0.50 to 0.60 % depending on the plan, with no fixed fee per transaction. This makes the QR-bill the cheapest form of invoice purchase — however, you bear the default risk yourself.

View detailed response

How long does it take for payment by QR-bill to be received?

Usually 1–2 business days if the customer initiates the payment via e-banking or mobile banking. The prerequisite is that both accounts are held with a Swiss bank.

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Activate QR-bill in your shop?

Find out how to set up the QR-bill as a payment method in just a few steps.

Activate QR-bill in your shop?

Find out how to set up the QR-bill as a payment method in just a few steps.